Taiy Chemical
Prion Protein (118-135) (human)
Synonym PRNP
Species Human
Protein Accession P04156
Purity Greater than 95% as determined by SDS-PAGE
Endotoxin Level < 1.0 EU per 1 μg of protein
Biological Activity Not specified
Expression System E. coli
Fusion Tag None
Predicted Molecular Mass 12.6 kDa
Formulation Lyophilized from a 0.2 μm filtered solution in PBS
Reconstitution Reconstitute in sterile distilled water
Storage & Stability Store at -20°C upon receipt, stable for up to 12 months at -20°C
FAQ
What are the primary functions of the Prion Protein (118-135) segment in humans?

The Prion Protein (PrP) segment from amino acids 118 to 135 is believed to play significant roles in the physiological and pathological functions of the entire prion protein. PrP is a normal cellular protein found in high concentrations in the brain, and it has been implicated in various cellular processes including cell signaling, protection against oxidative stress, and metal ion binding. This region, like other portions of the prion protein, is highly conserved across species, indicating its importance in the normal functioning of the organism. In terms of structure, the segment 118-135, often referred to as the “central domain,” is thought to contribute to the protein's overall conformation, affecting its normal cellular trafficking and localization.

Several studies have identified that certain sequences within this segment are crucial for the correct folding and post-translational modifications of the full PrP. Correct folding of PrP is vital to its normal function, and misfolding leads to the formation of prions, pathogenic isoforms responsible for transmissible spongiform encephalopathies (TSEs) such as Creutzfeldt-Jakob Disease in humans. The specific structure and amino acid sequence of the 118-135 segment may influence the protein’s propensity to adopt alternative misfolded conformations associated with disease.

Additionally, this segment is believed to engage in interactions with other cellular components, serving as a site for binding partners that may dictate the biological activity of the protein. It also has a role in the protein's interaction with lipid membranes, which is important for its normal cellular location and functioning. Therefore, understanding the particular roles of this segment can contribute to insights into the prion protein's involvement in neurodegenerative processes and could aid in the development of therapeutic strategies targeting prion diseases.

What insights have recent research studies provided about the structural aspects of Prion Protein (118-135)?

Recent research has offered substantial insights into the structural characteristics of the prion protein, particularly the segment encompassing amino acids 118-135. This region has been the focus of intense scrutiny due to its involvement in the misfolding processes that underlie prion diseases. Advances in structural biology techniques, like nuclear magnetic resonance (NMR) spectroscopy and X-ray crystallography, have uncovered details about the secondary structure and dynamic properties of this portion of the prion protein.

The segment 118-135 is generally part of a larger region that involves a high degree of structural plasticity. It appears as part of an unstructured loop or coil in the native form of the prion protein. This flexibility is hypothesized to be necessary for the protein's physiological roles, enabling it to engage in diverse interactions with various cellular partners. However, this plasticity could also predispose the protein to misfolding, particularly under stress conditions or in the presence of misfolded protein aggregates.

A notable finding from recent studies is that even minor alterations in this region can have substantial effects on the prion protein's stability and folding properties. For instance, point mutations within the 118-135 segment have been associated with familial forms of prion diseases. Structural studies of these mutants provide important data on how they might disrupt the normal conformation of the prion protein, leading to its aggregation. Furthermore, through a detailed understanding of the conformational flexibility within this segment, researchers have proposed models that describe intermediate structures formed during prion protein misfolding, which are thought to be critical in the pathogenic conversion process.

These insights are vital because they enhance the understanding of how a normally benign protein can turn into a disease-causing agent. Coupled with bioinformatics approaches, these structural insights also aid in identifying small molecules or peptides that can potentially stabilize this region, offering a pathway for therapeutic interventions aimed at preventing prion protein misfolding.

How does the Prion Protein (118-135) segment relate to prion diseases, and what therapeutic potentials does it have?

The Prion Protein (118-135) segment is intricately related to the pathogenesis of prion diseases, which are fatal, neurodegenerative disorders characterized by the accumulation of misfolded prion protein isoforms. This particular segment is believed to play a critical role in the initial misfolding event that leads to the conversion of the normal cellular prion protein (PrP^C) into the scrapie form (PrP^Sc), a protease-resistant isoform that induces the pathological changes seen in prion diseases.

In terms of its relationship to disease propagation, the 118-135 region of the prion protein has been implicated in the nucleation process that seeds the aggregation of normal prion proteins into amyloid fibrils. This nucleation process is thought to be initiated by small conformational changes in this segment, which can then induce further misfolding of adjacent prion protein molecules. Detailed biochemical studies have shown that this region might also be involved in stabilizing PrP^Sc aggregates, suggesting that interfering with its structure or function could hinder the spread of prion pathology.

The therapeutic potential of targeting the 118-135 segment is two-fold. Firstly, it is a prime target for therapeutic agents designed to stabilize PrP^C and prevent its conversion to PrP^Sc. Small molecules, peptides, or antibodies that bind this segment could conceivably lock the prion protein in its non-pathogenic conformation. Secondly, these insights create an avenue for vaccine development strategies that aim to elicit an immune response specifically against the pathological structures formed by prion proteins.

Recent research efforts have been directed toward designing such therapeutic candidates. For instance, computational models and high-throughput screening techniques are being used to identify compounds that could interfere with the pathological processes involving the 118-135 segment. Furthermore, understanding the sequence motifs within this segment that are essential for disease propagation opens up possibilities for designing peptide-based inhibitors that mimic these motifs and competitively inhibit the pathological conversion of PrP.

What role does the Prion Protein (118-135) segment play in the normal cellular functions of PrP?

The Prion Protein (118-135) segment is vital for the normal functioning of the prion protein (PrP) within cellular contexts. Though PrP is predominantly recognized for its role in prion diseases, it performs a variety of physiological roles in its native conformation. Within the human body, particularly in the brain, PrP is involved in several cellular processes including neuroprotection, cellular signaling, and metal ion homeostasis.

First and foremost, the 118-135 segment contributes to the overall structural integrity and conformation of PrP. This structural conformation is key to the protein's interaction with cell membranes and other cellular proteins, suggesting that it mediates crucial surface interactions. It is hypothesized that this domain is essential for acylation processes that anchor PrP to cell surfaces, affecting how it interacts with its surroundings and thereby influencing synaptic function.

Moreover, this segment is believed to be involved in the regulation of copper ion homeostasis. PrP is known to bind copper ions, and the presence of copper can affect PrP's structure and stability. The segment 118-135, within a broader region of the protein, helps maintain this metal-binding capacity, demonstrating a potential role in cellular antioxidant defense mechanisms. By binding copper, PrP may mitigate reactive oxygen species within cells, thus contributing to neuroprotection.

Additionally, some studies indicate the participation of the 118-135 segment in PrP's signaling functions. The protein has been suggested to act as a receptor involved in signal transduction processes, such as those influencing cell proliferation and differentiation. Such signaling roles are often mediated by PrP's ability to form complexes with other cellular receptors or proteins, wherein the structure of segments like 118-135 might modulate these interactions.

Therefore, the proper functioning of this segment is crucial for PrP's normal physiological roles, which serve protective functions in neurons and may influence a wide range of cellular activities beyond the nervous system. As research progresses, a clearer understanding of how this region modulates PrP’s diverse functional repertoire continues to emerge.

Is the Prion Protein (118-135) segment involved in any specific protein-protein interactions?

The Prion Protein (118-135) segment is indeed implicated in specific protein-protein interactions, which are crucial for both its normal biological functions and its role in disease. Within the cellular environment, prion protein's ability to interact with other proteins often dictates its various roles, including signaling processes, cellular growth, and synaptic maintenance. The segment 118-135, being a part of the protein structure that is relatively exposed and flexible, provides a site for such interactions, enabling the prion protein to fulfill its functional needs.

One of the essential interactions involving this PrP segment is with metal ions, particularly copper. Copper binding involves coordination sites on PrP, affecting its conformation and potentially its interactions with other metal-dependent enzymes. On a protein-protein interaction level, this segment contributes indirectly by modulating the protein’s structure accordingly, influencing other interaction sites.

Moreover, recent research highlights that this segment plays a role in mediating interactions with various cell surface receptors. PrP is known to interact with neural cell adhesion molecules (NCAMs), which are involved in processes like synapse formation and stability. The interactions between PrP and NCAMs are thought to be mediated through specific binding motifs within PrP, including regions around the 118-135 segment. These interactions suggest a role for PrP in enhancing neural plasticity and cell-cell communication.

Additionally, the involvement of the 118-135 segment in interactions with laminin, a major extracellular matrix component, has been noted. Laminin-PrP interactions are significant in cellular adhesion, affecting cell migration and differentiation. The capacity for PrP to bind to laminin may be pertinent in brain development and recovery processes post-injury.

Furthermore, given the pathological context, this segment might be indirectly involved in the misfolded prion protein aggregates' interaction with normal prion proteins, promoting the pathological conversion process. Understanding these interactions is critical since they may provide therapeutic targets for molecules designed to inhibit pathogenic binding, potentially reducing prion propagation in disease scenarios. Overall, research on these protein-protein interactions continues to expand our comprehension of PrP's role in health and disease.
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